Resources

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Our lab maintains multiple servers to provide the community with tools for using our methods:

Software and DBs

  • SpliVaP Database
    Database of Splice-mediated changes in Variant Proteins
  • MAISTAS 
    Modeling and Assessment of Isoforms Through Automated Server
  • DeTECTOR
    Detection Tool of Elements Controlling Translation of Open Reading frame
  • SysGenSim
    Simulation software for Systems Genetics
  • Pariga
    All-against-all BLAST on two sets of user-supplied amino acidic or nucleotide sequences
  • Orione
    An open, web-based platform for data intensive biomedical research, with a special focus on data generated with Next Generation Sequencing (NGS) technology. Orione is a custom version of Galaxy, running at our High Performance Computing Cluster and tailored for microbiology analysis.

 

Internal resources